Bioconductor

No posts found.

0 results • Page 1 of 1

Recent ...

Replies

Comment: EuroBioC2024 abstract submission is open! by Esperan • 0

Great information about the EuroBioC2024 conference! https://openreview.net/group?id=bioconductor.org/EuroBioC/2024/Conferences [slope](htt…

Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k

I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…

Comment: Adjusted p-values become NA when sub-setting samples by txema.heredia • 0

Thanks! I've been looking into DESeq2's code and, indeed, I get matching results when running manually the code inherited from the `genefi…

Answer: DESeq2 interaction between cancer cells and microenvironment cells by Michael Love 42k

I don't really know what you mean by "come from the contamination". You can look at the main effects and the interaction, but I don't know …

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Fahd • 0

Thanks for looking into this. This issue results in the incorrect usage of multiple ORA software including EnrichR.

Votes

A: p.adjust BH generates duplicate values

Awards • All

Supporter to Paul Harrison ▴ 100

Popular Question to Mikhail Dozmorov ▴ 30